過去の原著論文(~2008年)

2008年

Watanabe H, Kobayashi K, Kato Y, Oda S, Abe R, Tatarazako N, Iguchi T. Genomic Response in Daphnia to Chemical Pollutants., Interdisciplinary Studies on Environmental Chemistry—Biological Responses to Chemical Pollutants, Eds., Y. Murakami, K. Nakayama, S.-I. Kitamura, H. Iwata and S. Tanabe, 133–142. By TERRAPUB, 2008

Watanabe, H., Kobayashi, K., Kato, Y., Oda, S., Abe, R., Tatarazako, N. & Iguchi, T.
Transcriptome profiling in crustaceans as a tool for ecotoxicogenomics: Daphnia magna DNA microarray.
Cell Biol Toxicol 24, 641-647, (2008).

Nakamura, T., Katsu, Y., Watanabe, H. & Iguchi, T.
Estrogen receptor subtypes selectively mediate female mouse reproductive abnormalities induced by neonatal exposure to estrogenic chemicals.
Toxicology 253, 117-124, (2008).

Milnes, M. R. et al.
Activation of steroid and xenobiotic receptor (SXR, NR1I2) and its orthologs in laboratory, toxicologic, and genome model species.
Environ Health Perspect 116, 880-885, (2008).

Kato, Y., Kobayashi, K., Oda, S., Colbourn, J. K., Tatarazako, N., Watanabe, H. & Iguchi, T.
Molecular cloning and sexually dimorphic expression of DM-domain genes in Daphnia magna.
Genomics 91, 94-101, (2008).

Iguchi, T., Watanabe, H., Ohta, Y. & Blumberg, B.
Developmental effects: oestrogen-induced vaginal changes and organotin-induced adipogenesis.
Int J Androl 31, 263-268, (2008).

Hase, Y. et al.
Atrazine binds to F1F0-ATP synthase and inhibits mitochondrial function in sperm.
Biochem Biophys Res Commun 366, 66-72, (2008).

Connon, R. et al.
Linking molecular and population stress responses in Daphnia magna exposed to cadmium.
Environ Sci Technol 42, 2181-2188, (2008).
 

Yanagida, H., Matsuura, T. & Yomo, T.
Compensatory evolution of a WW domain variant lacking the strictly conserved Trp residue.
J Mol Evol 66, 61-71, (2008).

Kita, H. et al.
Replication of genetic information with self-encoded replicase in liposomes.
Chembiochem 9, 2403-2410, (2008).

Kazuta, Y., Adachi, J., Matsuura, T., Ono, N., Mori, H. & Yomo, T.
Comprehensive analysis of the effects of Escherichia coli ORFs on protein translation reaction.
Mol Cell Proteomics 7, 1530-1540, (2008).

Ichihashi, N., Matsuura, T., Kita, H., Hosoda, K., Sunami, T., Tsukada, K. & Yomo, T.
Importance of translation-replication balance for efficient replication by the self-encoded replicase.
Chembiochem 9, 3023-3028, (2008).

Hosoda, K., Sunami, T., Kazuta, Y., Matsuura, T., Suzuki, H. & Yomo, T.
Quantitative study of the structure of multilamellar giant liposomes as a container of protein synthesis reaction.
Langmuir 24, 13540-13548, (2008).

Hosoda, K., Matsuura, T., Kita, H., Ichihashi, N., Tsukada, K., Urabe, I. & Yomo, T.
A novel sequence-specific RNA quantification method using nicking endonuclease, dual-labeled fluorescent DNA probe, and conformation-interchangeable oligo-DNA.
RNA 14, 584-592, (2008).

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2007年

Urushitani, H., Katsu, Y., Kato, Y., Tooi, O., Santo, N., Kawashima, Y., Ohta, Y., Kisaka, Y., Lange, A., Tyler, C. R., Johnson, R. D., Iguchi, T., Medaka (Oryzias latipes) for use in evaluating developmental effects of endocrine active chemicals with special reference to gonadal intersex (testis-ova). Environmental Science, 14: 211-233 (2007)

 Watanabe, H., Takahashi, E., Nakamura, Y., Oda, S., Tatarazako, N. & Iguchi, T.
Development of a Daphnia magna DNA microarray for evaluating the toxicity of environmental chemicals.
Environ Toxicol Chem 26, 669-676, (2007).

Suzuki, A., Urushitani, H., Watanabe, H., Sato, T., Iguchi, T., Kobayashi, T. & Ohta, Y.
Comparison of estrogen responsive genes in the mouse uterus, vagina and mammary gland.
J Vet Med Sci 69, 725-731, (2007).

Suzuki, A., Urushitani, H., Sato, T., Kobayashi, T., Watanabe, H., Ohta, Y. & Iguchi, T.
Gene expression change in the Mullerian duct of the mouse fetus exposed to diethylstilbestrol in utero.
Exp Biol Med (Maywood) 232, 503-514, (2007).

Kato, Y., Kobayashi, K., Oda, S., Tatarazako, N., Watanabe, H. & Iguchi, T.
Cloning and characterization of the ecdysone receptor and ultraspiracle protein from the water flea Daphnia magna.
J Endocrinol 193, 183-194, (2007).

Iguchi, T., Watanabe, H. & Katsu, Y.
Toxicogenomics and ecotoxicogenomics for studying endocrine disruption and basic biology.
Gen Comp Endocrinol 153, 25-29, (2007).

Iguchi, T., Katsu, Y., Horiguchi, T., Watanabe, H., Blumberg, B. & Ohta, Y.
Endocrine disrupting organotin compounds are potent inducers of imposex in gastropods and adipogenesis in vertebrates.
Molecular & Cellular Toxicology 3, 1-10, (2007). ≪Go to ISI≫://000246529300001
 

Matsuura, T., Yanagida, H., Ushioda, J., Urabe, I. & Yomo, T.
Nascent chain, mRNA, and ribosome complexes generated by a pure translation system.
Biochem Biophys Res Commun 352, 372-377, (2007).

Hosoda, K., Matsuura, T., Kita, H., Ichihashi, N., Tsukada, K. & Yomo, T.
Kinetic analysis of the entire RNA amplification process by Qbeta replicase.
J Biol Chem 282, 15516-15527, (2007).

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2006年

Tokishita, S., Kato, Y., Kobayashi, T., Nakamura, S., Ohta, T., Yamagata, H., Organization and repression by juvenile hormone of a vitellogenin gene cluster in the crustacean, Daphnia magna.Biochemical and Biophysical Research Communications 345, 362-370, (2006)

Watanabe, H., Takahashi, E., Kobayashi, M., Goto, M., Krust, A., Chambon, P. & Iguchi, T.
The estrogen-responsive adrenomedullin and receptor-modifying protein 3 gene identified by DNA microarray analysis are directly regulated by estrogen receptor.
J Mol Endocrinol 36, 81-89, (2006).

Watanabe, H. & Iguchi, T.
Using ecotoxicogenomics to evaluate the impact of chemicals on aquatic organisms.
Marine Biology 149, 107-115, (2006). ≪Go to ISI≫://000236620500012

Taylor, J. A. et al.
Physiological concentrations of estradiol up-regulate androgen receptor mRNA through an estrogen receptor-mediated mechanism in fetal mouse urogenital sinus mesenchyme cells.
Biology of Reproduction, 102-102, (2006). ≪Go to ISI≫://000239059500191

Suzuki, A., Watanabe, H., Mizutani, T., Sato, T., Ohta, Y. & Iguchi, T.
Global gene expression in mouse vaginae exposed to diethylstilbestrol at different ages.
Exp Biol Med (Maywood) 231, 632-640, (2006).

Ogura, Y. et al.
TFII-I down-regulates a subset of estrogen-responsive genes through its interaction with an initiator element and estrogen receptor alpha.
Genes Cells 11, 373-381, (2006).

Oda, S., Tatarazako, N., Watanabe, H., Morita, M. & Iguchi, T.
Genetic differences in the production of male neonates in Daphnia magna exposed to juvenile hormone analogs.
Chemosphere 63, 1477-1484, (2006).

Nakamura, T., Katsu, Y., Watanabe, H. & Iguchi, T.
Expression of wnt family genes in mouse vagina exposed neonatally to diethylstilbestrol.
Zoological Science 23, 1216-1216, (2006). ≪Go to ISI≫://000245170200544

Kobayashi, M., Takahashi, E., Miyagawa, S., Watanabe, H. & Iguchi, T.
Chromatin immunoprecipitation-mediated target identification proved aquaporin 5 is regulated directly by estrogen in the uterus.
Genes Cells 11, 1133-1143, (2006).

Kato, Y., Kobayashi, K., Katsu, Y., Watanabe, H. & Iguchi, T.
Molecular cloning and expression of DM domain genes from the water flea, Daphnia magna.
Zoological Science 23, 1182-1182, (2006). ≪Go to ISI≫://000245170200298

Kato, H., Naito, K., Katsu, Y., Watanabe, H., Ohta, Y. & Iguchi, T.
Ontogenic expression of estrogen receptor-alpha in female rat corneas.
Ophthalmic Res 38, 361-365, (2006).

Kato, H., Furuhashi, T., Tanaka, M., Katsu, Y., Watanabe, H., Ohta, Y. & Iguchi, T.
Effects of bisphenol A given neonatally on reproductive functions of male rats.
Reprod Toxicol 22, 20-29, (2006).

Kabe, Y. et al.
Porphyrin accumulation in mitochondria is mediated by 2-oxoglutarate carrier.
J Biol Chem 281, 31729-31735, (2006).

Iguchi, T., Watanabe, H. & Katsu, Y.
Application of ecotoxicogenomics for studying endocrine disruption in vertebrates and invertebrates.
Environ Health Perspect 114 Suppl 1, 101-105, (2006).

Grun, F. et al.
Endocrine-disrupting organotin compounds are potent inducers of adipogenesis in vertebrates.
Mol Endocrinol 20, 2141-2155, (2006).
 

Sunami, T., Sato, K., Matsuura, T., Tsukada, K., Urabe, I. & Yomo, T.
Femtoliter compartment in liposomes for in vitro selection of proteins.
Anal Biochem 357, 128-136, (2006).

Matsuura, T. & Yomo, T.
In vitro evolution of proteins.
J Biosci Bioeng 101, 449-456, (2006).

Kita, H. et al.
Functional Qbeta replicase genetically fusing essential subunits EF-Ts and EF-Tu with beta-subunit.
J Biosci Bioeng 101, 421-426, (2006).

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2005年

Watanabe, H., Tatarazako, N., Oda, S., Nishide, H., Uchiyama, I., Morita, M. & Iguchi, T.
Analysis of expressed sequence tags of the water flea Daphnia magna.
Genome 48, 606-609, (2005).

Sone, K. et al.
Effects of an androgenic growth promoter 17beta-trenbolone on masculinization of Mosquitofish (Gambusia affinis affinis).
Gen Comp Endocrinol 143, 151-160, (2005).

Shimizu, N. et al.
HEXIM1 forms a transcriptionally abortive complex with glucocorticoid receptor without involving 7SK RNA and positive transcription elongation factor b.
Proc Natl Acad Sci U S A 102, 8555-8560, (2005).

Ohtsu, Y. et al.
Selective ligand purification using high-performance affinity beads.
Anal Biochem 338, 245-252, (2005).

Oda, S., Tatarazako, N., Watanabe, H., Morita, M. & Iguchi, T.
Production of male neonates in four cladoceran species exposed to a juvenile hormone analog, fenoxycarb.
Chemosphere 60, 74-78, (2005).

Oda, S., Tatarazako, N., Watanabe, H., Morita, M. & Iguchi, T.
Production of male neonates in Daphnia magna (Cladocera, Crustacea) exposed to juvenile hormones and their analogs.
Chemosphere 61, 1168-1174, (2005).

Hussein, G., Nakamura, M., Zhao, Q., Iguchi, T., Goto, H., Sankawa, U. & Watanabe, H.
Antihypertensive and neuroprotective effects of astaxanthin in experimental animals.
Biol Pharm Bull 28, 47-52, (2005).

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2004年

Kato, Y., Tokishita, S., Ohta, T., Yamagata, H., A vitellogenin chain containing a superoxide dismutase-like domain is the major component of yolk proteins in cladoceran crustacean Daphnia magna. Gene, 334: 157-165 (2004)

Watanabe, H., Suzuki, A., Goto, M., Ohsako, S., Tohyama, C., Handa, H. & Iguchi, T.
Comparative uterine gene expression analysis after dioxin and estradiol administration.
J Mol Endocrinol 33, 763-771, (2004).

Watanabe, H., Suzuki, A., Goto, M., Lubahn, D. B., Handa, H. & Iguchi, T.
Tissue-specific estrogenic and non-estrogenic effects of a xenoestrogen, nonylphenol.
J Mol Endocrinol 33, 243-252, (2004).

Sone, K., Hinago, M., Kitayama, A., Morokuma, J., Ueno, N., Watanabe, H. & Iguchi, T.
Effects of 17beta-estradiol, nonylphenol, and bisphenol-A on developing Xenopus laevis embryos.
Gen Comp Endocrinol 138, 228-236, (2004).

Okada, A., Ohta, Y., Brody, S. L., Watanabe, H., Krust, A., Chambon, P. & Iguchi, T.
Role of foxj1 and estrogen receptor alpha in ciliated epithelial cell differentiation of the neonatal oviduct.
J Mol Endocrinol 32, 615-625, (2004).

Miyagawa, S. et al.
Persistent gene expression in mouse vagina exposed neonatally to diethylstilbestrol.
J Mol Endocrinol 32, 663-677, (2004).

Miyagawa, S., Katsu, Y., Watanabe, H. & Iguchi, T.
Estrogen-independent activation of erbBs signaling and estrogen receptor alpha in the mouse vagina exposed neonatally to diethylstilbestrol.
Oncogene 23, 340-349, (2004).

Kato, H., Iwata, T., Katsu, Y., Watanabe, H., Ohta, Y. & Iguchi, T.
Evaluation of estrogenic activity in diets for experimental animals using in vitro assay.
J Agric Food Chem 52, 1410-1414, (2004).

Hirata, K., Takeuchi, S., Suzuki, A., Watanabe, H., Iguchi, T. & Takahashi, S.
Matrix metalloproteinase mRNA expression in the mouse uterus.
Zoological Science 21, 1336-1336, (2004). ≪Go to ISI≫://000237651300633

Han, S. I. et al.
Rep68 protein of adeno-associated virus type 2 interacts with 14-3-3 proteins depending on phosphorylation at serine 535.
Virology 320, 144-155, (2004).

Endoh, M. et al.
Human Spt6 stimulates transcription elongation by RNA polymerase II in vitro.
Mol Cell Biol 24, 3324-3336, (2004).
 

Matsuura, T. & Pluckthun, A.
Strategies for selection from protein libraries composed of de novo designed secondary structure modules.
Orig Life Evol Biosph 34, 151-157, (2004).

Matsuura, T., Ernst, A., Zechel, D. L. & Pluckthun, A.
Combinatorial approaches to novel proteins.
Chembiochem 5, 177-182, (2004).

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2003年

Watanabe, H. et al.
Analysis of temporal changes in the expression of estrogen-regulated genes in the uterus.
J Mol Endocrinol 30, 347-358, (2003).

Watanabe, H., Suzuki, A., Kobayashi, M., Lubahn, D. B., Handa, H. & Iguchi, T.
Similarities and differences in uterine gene expression patterns caused by treatment with physiological and non-physiological estrogens.
J Mol Endocrinol 31, 487-497, (2003).

Tatarazako, N., Oda, S., Watanabe, H., Morita, M. & Iguchi, T.
Juvenile hormone agonists affect the occurrence of male Daphnia.
Chemosphere 53, 827-833, (2003).

Kanesashi, S. N. et al.
Simian virus 40 VP1 capsid protein forms polymorphic assemblies in vitro.
J Gen Virol 84, 1899-1905, (2003).

Inui, M. et al.
Effect of UV screens and preservatives on vitellogenin and choriogenin production in male medaka (Oryzias latipes).
Toxicology 194, 43-50, (2003).
 

Matsuura, T. & Pluckthun, A.
Selection based on the folding properties of proteins with ribosome display.
FEBS Lett 539, 24-28, (2003).

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2002年

Watanabe, H., Suzuki, A., Mizutani, T., Khono, S., Lubahn, D. B., Handa, H. & Iguchi, T.
Genome-wide analysis of changes in early gene expression induced by oestrogen.
Genes Cells 7, 497-507, (2002).

Watanabe, H., Iguchi, T. & Morohashi, K.
[Endocrine disruptors and nuclear receptors].
Nippon Rinsho 60, 397-403, (2002).

Uchida, K. et al.
Bisphenol-A administration during pregnancy results in fetal exposure in mice and monkeys.
Journal of Health Science 48, 579-582, (2002)
Suzuki, A. et al.
Developmental effects of perinatal exposure to bisphenol-A and diethylstilbestrol on reproductive organs in female mice.
Reprod Toxicol 16, 107-116, (2002).

Sawa, C. et al.
YEAF1/RYBP and YAF-2 are functionally distinct members of a cofactor family for the YY1 and E4TF1/hGABP transcription factors.
J Biol Chem 277, 22484-22490, (2002).

Nishi, T. et al.
Spatial redox regulation of a critical cysteine residue of NF-kappa B in vivo.
J Biol Chem 277, 44548-44556, (2002).

Iguchi, T. et al.
Developmental toxicity of estrogenic chemicals on rodents and other species.
Congenit Anom (Kyoto) 42, 94-105, (2002).

Honma, S., Suzuki, A., Buchanan, D. L., Katsu, Y., Watanabe, H. & Iguchi, T.
Low dose effect of in utero exposure to bisphenol A and diethylstilbestrol on female mouse reproduction.
Reprod Toxicol 16, 117-122, (2002).
 

Matsuura, T., Yomo, T. & Urabe, I.
Evolutionary molecular engineering by random elongation mutagenesis.
Methods Mol Biol 182, 221-230, (2002).

Matsuura, T., Yamaguchi, M., Ko-Mitamura, E. P., Shima, Y., Urabe, I. & Yomo, T.
Importance of compartment formation for a self-encoding system.
Proc Natl Acad Sci U S A 99, 7514-7517, (2002).

Matsuura, T., Ernst, A. & Pluckthun, A.
Construction and characterization of protein libraries composed of secondary structure modules.
Protein Sci 11, 2631-2643, (2002).

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2001年

Ishizu, K. I. et al.
Roles of disulfide linkage and calcium ion-mediated interactions in assembly and disassembly of virus-like particles composed of simian virus 40 VP1 capsid protein.
J Virol 75, 61-72, (2001).

Iguchi, T., Watanabe, H. & Katsu, Y.
Developmental effects of estrogenic agents on mice, fish, and frogs: a mini-review.
Horm Behav 40, 248-251, (2001).

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2000年

Shimizu, N. et al.
High-performance affinity beads for identifying drug receptors.
Nat Biotechnol 18, 877-881, (2000).

Iguchi, T., Watanabe, H. & Arisono, K.
[Effects of endocrine disruptors on ecology--reports from the Gordon Reserch Conference of Environmental Endrocrine Disruptors].
Nippon Rinsho 58, 2401-2408, (2000).

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1999年

Watanabe, H. et al.
Experimental autoimmune thyroiditis induced by thyroglobulin-pulsed dendritic cells.
Autoimmunity 31, 273-282, (1999).

Sawada, J. et al.
Synergistic transcriptional activation by hGABP and select members of the activation transcription factor/cAMP response element-binding protein family.
J Biol Chem 274, 35475-35482, (1999).

Hoque, M. et al.
Chimeric virus-like particle formation of adeno-associated virus.
Biochem Biophys Res Commun 266, 371-376, (1999).

Hoque, M. et al.
Nuclear transport of the major capsid protein is essential for adeno-associated virus capsid formation.
J Virol 73, 7912-7915, (1999).
 

Matsuura, T. et al.
Evolutionary molecular engineering by random elongation mutagenesis.
Nat Biotechnol 17, 58-61, (1999).

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1998年

Watanabe, H., Zoli, M. & Changeux, J. P.
Promoter analysis of the neuronal nicotinic acetylcholine receptor alpha4 gene: methylation and expression of the transgene.
Eur J Neurosci 10, 2244-2253, (1998).

Suzuki, F., Goto, M., Sawa, C., Ito, S., Watanabe, H., Sawada, J. & Handa, H.
Functional interactions of transcription factor human GA-binding protein subunits.
J Biol Chem 273, 29302-29308, (1998).
 

Matsuura, T., Yomo, T., Trakulnaleamsai, S., Ohashi, Y., Yamamoto, K. & Urabe, I.
Nonadditivity of mutational effects on the properties of catalase I and its application to efficient directed evolution.
Protein Eng 11, 789-795, (1998).

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1997年

Sowa, Y. et al.
Retinoblastoma binding factor 1 site in the core promoter region of the human RB gene is activated by hGABP/E4TF1.
Cancer Res 57, 3145-3148, (1997).

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1996年

Sawa, C., Goto, M., Suzuki, F., Watanabe, H., Sawada, J. & Handa, H.
Functional domains of transcription factor hGABP beta1/E4TF1-53 required for nuclear localization and transcription activation.
Nucleic Acids Res 24, 4954-4961, (1996).

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1995年

Wada, T., Watanabe, H., Kawaguchi, H. & Handa, H.
DNA affinity chromatography.
Methods Enzymol 254, 595-604, (1995).

Sawada, J., Goto, M., Watanabe, H., Handa, H. & Yoshida, M. C.
Regional mapping of two subunits of transcription factor E4TF1 to human chromosome.
Jpn J Cancer Res 86, 10-12, (1995).

Goto, M. et al.
Assignment of the E4TF1-60 gene to human chromosome 21q21.2-q21.3.
Gene 166, 337-338, (1995).

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1994年

Sawada, J., Goto, M., Sawa, C., Watanabe, H. & Handa, H.
Transcriptional activation through the tetrameric complex formation of E4TF1 subunits.
Embo J 13, 1396-1402, (1994).

Savoysky, E. et al.
The retinoblastoma binding factor 1 (RBF-1) site in RB gene promoter binds preferentially E4TF1, a member of the Ets transcription factors family.
Oncogene 9, 1839-1846, (1994).

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1993年

Watanabe, H., Sawada, J., Yano, K., Yamaguchi, K., Goto, M. & Handa, H.
cDNA cloning of transcription factor E4TF1 subunits with Ets and notch motifs.
Mol Cell Biol 13, 1385-1391, (1993).

Ma, D. et al.
Isolation of a cDNA encoding the largest subunit of TFIIA reveals functions important for activated transcription.
Genes Dev 7, 2246-2257, (1993).

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1991年

Wada, T., Watanabe, H., Usuda, Y. & Handa, H.
Different biological activities of the hetero- and homodimers formed by the 47- and 43-kilodalton proteins of transcription factor ATF/E4TF3.
J Virol 65, 557-564, (1991).

Mizutani, M., Ohta, T., Watanabe, H., Handa, H. & Hirose, S.
Negative supercoiling of DNA facilitates an interaction between transcription factor IID and the fibroin gene promoter.
Proc Natl Acad Sci U S A 88, 718-722, (1991).

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1990年

Watanabe, H., Wada, T., Usuda, Y. & Handa, H.
[Protein-protein interactions on transcriptional regulation--concerned with adenovirus E4 gene].
Tanpakushitsu Kakusan Koso 35, 2825-2831, (1990).

Watanabe, H., Wada, T. & Handa, H.
Transcription factor E4TF1 contains two subunits with different functions.
Embo J 9, 841-847, (1990).

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1989年

Meshi, T., Motoyoshi, F., Maeda, T., Yoshiwoka, S., Watanabe, H. & Okada, Y.
Mutations in the tobacco mosaic virus 30-kD protein gene overcome Tm-2 resistance in tomato.
Plant Cell 1, 515-522, (1989).

Kawaguchi, H., Asai, A., Ohtsuka, Y., Watanabe, H., Wada, T. & Handa, H.
Purification of DNA-binding transcription factors by their selective adsorption on the affinity latex particles.
Nucleic Acids Res 17, 6229-6240, (1989).

Handa, H., Watanabe, H., Suzuki, Y. & Hirose, S.
Effect of DNA supercoiling on in vitro transcription from the adenovirus early region 4.
FEBS Lett 249, 17-20, (1989).

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1988年

Watanabe, H., Imai, T., Sharp, P. A. & Handa, H.
Identification of two transcription factors that bind to specific elements in the promoter of the adenovirus early-region 4.
Mol Cell Biol 8, 1290-1300, (1988).

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1985年

Handa, H., Watanabe, H. & Nishigaki, T.
[Transcriptional regulation of adenovirus E4 gene].
Tanpakushitsu Kakusan Koso 30, 1570-1579, (1985).

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